Authors: Type:

2018

  • [DOI] J. A. Gandier and E. R. Master, “Pichia pastoris is a suitable host for the heterologous expression of predicted class i and class ii hydrophobins for discovery, study, and application in biotechnology,” Microorganisms, vol. 6, iss. 1, 2018.
    [Bibtex]
    @article{RN10,
    author = {Gandier, J. A. and Master, E. R.},
    title = {Pichia pastoris is a Suitable Host for the Heterologous Expression of Predicted Class I and Class II Hydrophobins for Discovery, Study, and Application in Biotechnology},
    journal = {Microorganisms},
    volume = {6},
    number = {1},
    ISSN = {2076-2607 (Print)
    2076-2607 (Linking)},
    DOI = {10.3390/microorganisms6010003},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/29303996},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] R. E. Goacher, E. J. Braham, C. L. Michienzi, R. M. Flick, A. F. Yakunin, and E. R. Master, “Direct analysis by time-of-flight secondary ion mass spectrometry reveals action of bacterial laccase-mediator systems on both hardwood and softwood samples,” Physiol plant, vol. 164, iss. 1, pp. 5-16, 2018.
    [Bibtex]
    @article{RN11,
    author = {Goacher, R. E. and Braham, E. J. and Michienzi, C. L. and Flick, R. M. and Yakunin, A. F. and Master, E. R.},
    title = {Direct analysis by time-of-flight secondary ion mass spectrometry reveals action of bacterial laccase-mediator systems on both hardwood and softwood samples},
    journal = {Physiol Plant},
    volume = {164},
    number = {1},
    pages = {5-16},
    ISSN = {1399-3054 (Electronic)
    0031-9317 (Linking)},
    DOI = {10.1111/ppl.12688},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/29286544},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] S. Guo, D. N. Langelaan, S. W. Phippen, S. P. Smith, I. K. Voets, and P. L. Davies, “Conserved structural features anchor biofilm-associated rtx-adhesins to the outer membrane of bacteria,” Febs j, vol. 285, iss. 10, pp. 1812-1826, 2018.
    [Bibtex]
    @article{RN7,
    author = {Guo, S. and Langelaan, D. N. and Phippen, S. W. and Smith, S. P. and Voets, I. K. and Davies, P. L.},
    title = {Conserved structural features anchor biofilm-associated RTX-adhesins to the outer membrane of bacteria},
    journal = {FEBS J},
    volume = {285},
    number = {10},
    pages = {1812-1826},
    ISSN = {1742-4658 (Electronic)
    1742-464X (Linking)},
    DOI = {10.1111/febs.14441},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/29575515},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] E. Jurak, H. Suzuki, G. van Erven, J. A. Gandier, P. Wong, K. Chan, C. Y. Ho, Y. Gong, E. Tillier, M. N. Rosso, M. A. Kabel, S. Miyauchi, and E. R. Master, “Dynamics of the phanerochaete carnosa transcriptome during growth on aspen and spruce,” Bmc genomics, vol. 19, iss. 1, p. 815, 2018.
    [Bibtex]
    @article{RN3,
    author = {Jurak, E. and Suzuki, H. and van Erven, G. and Gandier, J. A. and Wong, P. and Chan, K. and Ho, C. Y. and Gong, Y. and Tillier, E. and Rosso, M. N. and Kabel, M. A. and Miyauchi, S. and Master, E. R.},
    title = {Dynamics of the Phanerochaete carnosa transcriptome during growth on aspen and spruce},
    journal = {BMC Genomics},
    volume = {19},
    number = {1},
    pages = {815},
    ISSN = {1471-2164 (Electronic)
    1471-2164 (Linking)},
    DOI = {10.1186/s12864-018-5210-z},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/30424733},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] B. MacCormick, T. V. Vuong, and E. R. Master, “Chemo-enzymatic synthesis of clickable xylo-oligosaccharide monomers from hardwood 4-o-methylglucuronoxylan,” Biomacromolecules, vol. 19, iss. 2, pp. 521-530, 2018.
    [Bibtex]
    @article{RN8,
    author = {MacCormick, B. and Vuong, T. V. and Master, E. R.},
    title = {Chemo-enzymatic Synthesis of Clickable Xylo-oligosaccharide Monomers from Hardwood 4-O-Methylglucuronoxylan},
    journal = {Biomacromolecules},
    volume = {19},
    number = {2},
    pages = {521-530},
    ISSN = {1526-4602 (Electronic)
    1525-7797 (Linking)},
    DOI = {10.1021/acs.biomac.7b01642},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/29338223},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] M. J. Mauricio da Fonseca, E. Jurak, K. Kataja, E. R. Master, J. G. Berrin, I. Stals, T. Desmet, A. Van Landschoot, and Y. Briers, “Analysis of the substrate specificity of alpha-l-arabinofuranosidases by dna sequencer-aided fluorophore-assisted carbohydrate electrophoresis,” Appl microbiol biotechnol, vol. 102, iss. 23, pp. 10091-10102, 2018.
    [Bibtex]
    @article{RN4,
    author = {Mauricio da Fonseca, M. J. and Jurak, E. and Kataja, K. and Master, E. R. and Berrin, J. G. and Stals, I. and Desmet, T. and Van Landschoot, A. and Briers, Y.},
    title = {Analysis of the substrate specificity of alpha-L-arabinofuranosidases by DNA sequencer-aided fluorophore-assisted carbohydrate electrophoresis},
    journal = {Appl Microbiol Biotechnol},
    volume = {102},
    number = {23},
    pages = {10091-10102},
    ISSN = {1432-0614 (Electronic)
    0175-7598 (Linking)},
    DOI = {10.1007/s00253-018-9389-3},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/30267127},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] F. M. Razeq, E. Jurak, P. J. Stogios, R. Yan, M. Tenkanen, M. A. Kabel, W. Wang, and E. R. Master, “A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans,” Biotechnol biofuels, vol. 11, p. 74, 2018.
    [Bibtex]
    @article{RN6,
    author = {Razeq, F. M. and Jurak, E. and Stogios, P. J. and Yan, R. and Tenkanen, M. and Kabel, M. A. and Wang, W. and Master, E. R.},
    title = {A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans},
    journal = {Biotechnol Biofuels},
    volume = {11},
    pages = {74},
    ISSN = {1754-6834 (Print)
    1754-6834 (Linking)},
    DOI = {10.1186/s13068-018-1074-3},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/29588659},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] W. Wang, N. Andric, C. Sarch, B. T. Silva, M. Tenkanen, and E. R. Master, “Constructing arabinofuranosidases for dual arabinoxylan debranching activity,” Biotechnol bioeng, vol. 115, iss. 1, pp. 41-49, 2018.
    [Bibtex]
    @article{RN12,
    author = {Wang, W. and Andric, N. and Sarch, C. and Silva, B. T. and Tenkanen, M. and Master, E. R.},
    title = {Constructing arabinofuranosidases for dual arabinoxylan debranching activity},
    journal = {Biotechnol Bioeng},
    volume = {115},
    number = {1},
    pages = {41-49},
    ISSN = {1097-0290 (Electronic)
    0006-3592 (Linking)},
    DOI = {10.1002/bit.26445},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28868788},
    year = {2018},
    type = {Journal Article}
    }
  • [DOI] B. Wu, J. Gaskell, B. W. Held, C. Toapanta, T. Vuong, S. Ahrendt, A. Lipzen, J. Zhang, J. S. Schilling, E. Master, I. V. Grigoriev, R. A. Blanchette, D. Cullen, and D. S. Hibbett, “Substrate-specific differential gene expression and rna editing in the brown rot fungus fomitopsis pinicola,” Appl environ microbiol, vol. 84, iss. 16, 2018.
    [Bibtex]
    @article{RN5,
    author = {Wu, B. and Gaskell, J. and Held, B. W. and Toapanta, C. and Vuong, T. and Ahrendt, S. and Lipzen, A. and Zhang, J. and Schilling, J. S. and Master, E. and Grigoriev, I. V. and Blanchette, R. A. and Cullen, D. and Hibbett, D. S.},
    title = {Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola},
    journal = {Appl Environ Microbiol},
    volume = {84},
    number = {16},
    ISSN = {1098-5336 (Electronic)
    0099-2240 (Linking)},
    DOI = {10.1128/AEM.00991-18},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/29884757},
    year = {2018},
    type = {Journal Article}
    }

2017

  • [DOI] G. Arnal, M. A. Attia, J. Asohan, and H. Brumer, “A low-volume, parallel copper-bicinchoninic acid (bca) assay for glycoside hydrolases,” Methods mol biol, vol. 1588, pp. 3-14, 2017.
    [Bibtex]
    @article{RN23,
    author = {Arnal, G. and Attia, M. A. and Asohan, J. and Brumer, H.},
    title = {A Low-Volume, Parallel Copper-Bicinchoninic Acid (BCA) Assay for Glycoside Hydrolases},
    journal = {Methods Mol Biol},
    volume = {1588},
    pages = {3-14},
    ISSN = {1940-6029 (Electronic)
    1064-3745 (Linking)},
    DOI = {10.1007/978-1-4939-6899-2_1},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28417356},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] P. Bule, V. D. Alves, V. Israeli-Ruimy, A. L. Carvalho, L. M. A. Ferreira, S. P. Smith, H. J. Gilbert, S. Najmudin, E. A. Bayer, and C. Fontes, “Assembly of ruminococcus flavefaciens cellulosome revealed by structures of two cohesin-dockerin complexes,” Sci rep, vol. 7, iss. 1, p. 759, 2017.
    [Bibtex]
    @article{RN19,
    author = {Bule, P. and Alves, V. D. and Israeli-Ruimy, V. and Carvalho, A. L. and Ferreira, L. M. A. and Smith, S. P. and Gilbert, H. J. and Najmudin, S. and Bayer, E. A. and Fontes, Cmga},
    title = {Assembly of Ruminococcus flavefaciens cellulosome revealed by structures of two cohesin-dockerin complexes},
    journal = {Sci Rep},
    volume = {7},
    number = {1},
    pages = {759},
    ISSN = {2045-2322 (Electronic)
    2045-2322 (Linking)},
    DOI = {10.1038/s41598-017-00919-w},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28389644},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] M. Fanuel, S. Garajova, D. Ropartz, N. McGregor, H. Brumer, H. Rogniaux, and J. G. Berrin, “The podospora anserina lytic polysaccharide monooxygenase palpmo9h catalyzes oxidative cleavage of diverse plant cell wall matrix glycans,” Biotechnol biofuels, vol. 10, p. 63, 2017.
    [Bibtex]
    @article{RN20,
    author = {Fanuel, M. and Garajova, S. and Ropartz, D. and McGregor, N. and Brumer, H. and Rogniaux, H. and Berrin, J. G.},
    title = {The Podospora anserina lytic polysaccharide monooxygenase PaLPMO9H catalyzes oxidative cleavage of diverse plant cell wall matrix glycans},
    journal = {Biotechnol Biofuels},
    volume = {10},
    pages = {63},
    ISSN = {1754-6834 (Print)
    1754-6834 (Linking)},
    DOI = {10.1186/s13068-017-0749-5},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28293293},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] J. A. Gandier, D. N. Langelaan, A. Won, K. O’Donnell, J. L. Grondin, H. L. Spencer, P. Wong, E. Tillier, C. Yip, S. P. Smith, and E. R. Master, “Characterization of a basidiomycota hydrophobin reveals the structural basis for a high-similarity class i subdivision,” Sci rep, vol. 7, p. 45863, 2017.
    [Bibtex]
    @article{RN17,
    author = {Gandier, J. A. and Langelaan, D. N. and Won, A. and O'Donnell, K. and Grondin, J. L. and Spencer, H. L. and Wong, P. and Tillier, E. and Yip, C. and Smith, S. P. and Master, E. R.},
    title = {Characterization of a Basidiomycota hydrophobin reveals the structural basis for a high-similarity Class I subdivision},
    journal = {Sci Rep},
    volume = {7},
    pages = {45863},
    ISSN = {2045-2322 (Electronic)
    2045-2322 (Linking)},
    DOI = {10.1038/srep45863},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28393921},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] J. M. Grondin, D. Duan, A. C. Kirlin, K. T. Abe, S. Chitayat, H. L. Spencer, C. Spencer, A. Campigotto, S. Houliston, C. H. Arrowsmith, J. S. Allingham, A. B. Boraston, and S. P. Smith, “Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from clostridium perfringens,” Plos one, vol. 12, iss. 2, p. e0171606, 2017.
    [Bibtex]
    @article{RN21,
    author = {Grondin, J. M. and Duan, D. and Kirlin, A. C. and Abe, K. T. and Chitayat, S. and Spencer, H. L. and Spencer, C. and Campigotto, A. and Houliston, S. and Arrowsmith, C. H. and Allingham, J. S. and Boraston, A. B. and Smith, S. P.},
    title = {Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens},
    journal = {PLoS One},
    volume = {12},
    number = {2},
    pages = {e0171606},
    ISSN = {1932-6203 (Electronic)
    1932-6203 (Linking)},
    DOI = {10.1371/journal.pone.0171606},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28158290},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] J. M. Grondin, D. N. Langelaan, and S. P. Smith, “Characterization of protein-carbohydrate interactions by nmr spectroscopy,” Methods mol biol, vol. 1588, pp. 143-156, 2017.
    [Bibtex]
    @article{RN1,
    author = {Grondin, J. M. and Langelaan, D. N. and Smith, S. P.},
    title = {Characterization of Protein-Carbohydrate Interactions by NMR Spectroscopy},
    journal = {Methods Mol Biol},
    volume = {1588},
    pages = {143-156},
    ISSN = {1940-6029 (Electronic)
    1064-3745 (Linking)},
    DOI = {10.1007/978-1-4939-6899-2_11},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28417366},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] J. M. Grondin, D. N. Langelaan, and S. P. Smith, “Characterization of protein-carbohydrate interactions by nmr spectroscopy,” Methods mol biol, vol. 1588, pp. 143-156, 2017.
    [Bibtex]
    @article{RN2,
    author = {Grondin, J. M. and Langelaan, D. N. and Smith, S. P.},
    title = {Characterization of Protein-Carbohydrate Interactions by NMR Spectroscopy},
    journal = {Methods Mol Biol},
    volume = {1588},
    pages = {143-156},
    ISSN = {1940-6029 (Electronic)
    1064-3745 (Linking)},
    DOI = {10.1007/978-1-4939-6899-2_11},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28417366},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] A. Hettle, A. Fillo, K. Abe, P. Massel, B. Pluvinage, D. N. Langelaan, S. P. Smith, and A. B. Boraston, “Properties of a family 56 carbohydrate-binding module and its role in the recognition and hydrolysis of beta-1,3-glucan,” J biol chem, vol. 292, iss. 41, pp. 16955-16968, 2017.
    [Bibtex]
    @article{RN13,
    author = {Hettle, A. and Fillo, A. and Abe, K. and Massel, P. and Pluvinage, B. and Langelaan, D. N. and Smith, S. P. and Boraston, A. B.},
    title = {Properties of a family 56 carbohydrate-binding module and its role in the recognition and hydrolysis of beta-1,3-glucan},
    journal = {J Biol Chem},
    volume = {292},
    number = {41},
    pages = {16955-16968},
    ISSN = {1083-351X (Electronic)
    0021-9258 (Linking)},
    DOI = {10.1074/jbc.M117.806711},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28827308},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] K. Littunen, G. Mai-Gisondi, J. Seppala, and E. R. Master, “Enzymatically debranched xylans in graft copolymerization,” Biomacromolecules, vol. 18, iss. 5, pp. 1634-1641, 2017.
    [Bibtex]
    @article{RN15,
    author = {Littunen, K. and Mai-Gisondi, G. and Seppala, J. and Master, E. R.},
    title = {Enzymatically Debranched Xylans in Graft Copolymerization},
    journal = {Biomacromolecules},
    volume = {18},
    number = {5},
    pages = {1634-1641},
    ISSN = {1526-4602 (Electronic)
    1525-7797 (Linking)},
    DOI = {10.1021/acs.biomac.7b00229},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28429930},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] G. Mai-Gisondi and E. R. Master, “Colorimetric detection of acetyl xylan esterase activities,” Methods mol biol, vol. 1588, pp. 45-57, 2017.
    [Bibtex]
    @article{RN16,
    author = {Mai-Gisondi, G. and Master, E. R.},
    title = {Colorimetric Detection of Acetyl Xylan Esterase Activities},
    journal = {Methods Mol Biol},
    volume = {1588},
    pages = {45-57},
    ISSN = {1940-6029 (Electronic)
    1064-3745 (Linking)},
    DOI = {10.1007/978-1-4939-6899-2_5},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28417360},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] N. McGregor, G. Arnal, and H. Brumer, “Quantitative kinetic characterization of glycoside hydrolases using high-performance anion-exchange chromatography (hpaec),” Methods mol biol, vol. 1588, pp. 15-25, 2017.
    [Bibtex]
    @article{RN24,
    author = {McGregor, N. and Arnal, G. and Brumer, H.},
    title = {Quantitative Kinetic Characterization of Glycoside Hydrolases Using High-Performance Anion-Exchange Chromatography (HPAEC)},
    journal = {Methods Mol Biol},
    volume = {1588},
    pages = {15-25},
    ISSN = {1940-6029 (Electronic)
    1064-3745 (Linking)},
    DOI = {10.1007/978-1-4939-6899-2_2},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28417357},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] S. P. Smith, E. A. Bayer, and M. Czjzek, “Continually emerging mechanistic complexity of the multi-enzyme cellulosome complex,” Curr opin struct biol, vol. 44, pp. 151-160, 2017.
    [Bibtex]
    @article{RN18,
    author = {Smith, S. P. and Bayer, E. A. and Czjzek, M.},
    title = {Continually emerging mechanistic complexity of the multi-enzyme cellulosome complex},
    journal = {Curr Opin Struct Biol},
    volume = {44},
    pages = {151-160},
    ISSN = {1879-033X (Electronic)
    0959-440X (Linking)},
    DOI = {10.1016/j.sbi.2017.03.009},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28390861},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] T. V. Vuong, B. Liu, M. Sandgren, and E. R. Master, “Microplate-based detection of lytic polysaccharide monooxygenase activity by fluorescence-labeling of insoluble oxidized products,” Biomacromolecules, vol. 18, iss. 2, pp. 610-616, 2017.
    [Bibtex]
    @article{RN22,
    author = {Vuong, T. V. and Liu, B. and Sandgren, M. and Master, E. R.},
    title = {Microplate-Based Detection of Lytic Polysaccharide Monooxygenase Activity by Fluorescence-Labeling of Insoluble Oxidized Products},
    journal = {Biomacromolecules},
    volume = {18},
    number = {2},
    pages = {610-616},
    ISSN = {1526-4602 (Electronic)
    1525-7797 (Linking)},
    DOI = {10.1021/acs.biomac.6b01790},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28125213},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] M. T. Wong, W. Wang, M. Couturier, F. M. Razeq, V. Lombard, P. Lapebie, E. A. Edwards, N. Terrapon, B. Henrissat, and E. R. Master, “Comparative metagenomics of cellulose- and poplar hydrolysate-degrading microcosms from gut microflora of the canadian beaver (castor canadensis) and north american moose (alces americanus) after long-term enrichment,” Front microbiol, vol. 8, p. 2504, 2017.
    [Bibtex]
    @article{RN9,
    author = {Wong, M. T. and Wang, W. and Couturier, M. and Razeq, F. M. and Lombard, V. and Lapebie, P. and Edwards, E. A. and Terrapon, N. and Henrissat, B. and Master, E. R.},
    title = {Comparative Metagenomics of Cellulose- and Poplar Hydrolysate-Degrading Microcosms from Gut Microflora of the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus) after Long-Term Enrichment},
    journal = {Front Microbiol},
    volume = {8},
    pages = {2504},
    ISSN = {1664-302X (Print)
    1664-302X (Linking)},
    DOI = {10.3389/fmicb.2017.02504},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/29326667},
    year = {2017},
    type = {Journal Article}
    }
  • [DOI] R. Yan, T. V. Vuong, W. Wang, and E. R. Master, “Action of a gh115 alpha-glucuronidase from amphibacillus xylanus at alkaline condition promotes release of 4-o-methylglucopyranosyluronic acid from glucuronoxylan and arabinoglucuronoxylan,” Enzyme microb technol, vol. 104, pp. 22-28, 2017.
    [Bibtex]
    @article{RN14,
    author = {Yan, R. and Vuong, T. V. and Wang, W. and Master, E. R.},
    title = {Action of a GH115 alpha-glucuronidase from Amphibacillus xylanus at alkaline condition promotes release of 4-O-methylglucopyranosyluronic acid from glucuronoxylan and arabinoglucuronoxylan},
    journal = {Enzyme Microb Technol},
    volume = {104},
    pages = {22-28},
    ISSN = {1879-0909 (Electronic)
    0141-0229 (Linking)},
    DOI = {10.1016/j.enzmictec.2017.05.004},
    url = {https://www.ncbi.nlm.nih.gov/pubmed/28648176},
    year = {2017},
    type = {Journal Article}
    }